Bug #2907
closedMPI and GLOBUS WS-GRAM adaptor
Added by Scardaci Diego almost 13 years ago. Updated over 12 years ago.
100%
Description
Dear All,
the MPI parameter "NUMBEROFPROCESSES" seems not working well.
Moreover, I'm not able to submit an MPI jobs through the GLOBUS WS-GRAM adaptor.
Cheers,
Diego Scardaci
Files
jsagajob.xml (2.23 KB) jsagajob.xml | Scardaci Diego, 07/11/2012 03:57 PM |
Updated by Schwarz Lionel almost 13 years ago
Diego, would it be possible for you to compare the JDL generated by JSAGA and the one generated by the Globus
client interface?
Thanks
Lionel
Updated by Scardaci Diego almost 13 years ago
Hi Lionel,
below the xml file generated by Globus. Do you know how can I get the xml file generated by JSAGA?
Cheers,
Diego
<job>
<factoryEndpoint xmlns:gram='http://www.globus.org/namespaces/2004/10/gram/job'
xmlns:wsa='http://schemas.xmlsoap.org/ws/2004/03/addressing'>
<wsa:Address>https://xn03.ctsf.cdacb.in:8443/wsrf/services/ManagedJobFactoryService&lt;/wsa:Address>
<wsa:ReferenceProperties>
<gram:ResourceID>PBS</gram:ResourceID>
</wsa:ReferenceProperties>
</factoryEndpoint>
<executable>diego_mpi</executable>
<stdout>${GLOBUS_USER_HOME}/stdout</stdout>
<stderr>${GLOBUS_USER_HOME}/stderr</stderr>
<count>2</count>
<hostCount>2</hostCount>
<jobType>mpi</jobType>
<fileStageIn>
<transfer>
<sourceUrl>gsiftp://gridway.pd.infn.it:2811/home/globus/diego_mpi_sample/diego_mpi</sourceUrl>
<destinationUrl>gsiftp://xn03.ctsf.cdacb.in:2811/${GLOBUS_USER_HOME}/diego_mpi</destinationUrl>
</transfer>
</fileStageIn>
<fileStageOut>
<transfer>
<sourceUrl>gsiftp://xn03.ctsf.cdacb.in:2811/${GLOBUS_USER_HOME}/stdout</sourceUrl>
<destinationUrl>gsiftp://gridway.pd.infn.it:2811/home/globus/diego_mpi_sample/stdout</destinationUrl>
</transfer>
<transfer>
<sourceUrl>gsiftp://xn03.ctsf.cdacb.in:2811/${GLOBUS_USER_HOME}/stderr</sourceUrl>
<destinationUrl>gsiftp://gridway.pd.infn.it:2811/home/globus/diego_mpi_sample/stderr</destinationUrl>
</transfer>
</fileStageOut>
<fileCleanUp>
<deletion>
<file>file:///${GLOBUS_USER_HOME}/stdout</file>
</deletion>
<deletion>
<file>file:///${GLOBUS_USER_HOME}/stderr</file>
</deletion>
<deletion>
<file>file:///${GLOBUS_USER_HOME}/diego_mpi</file>
</deletion>
</fileCleanUp>
</job>
Updated by Scardaci Diego almost 13 years ago
Hi Lionel,
below the XML generated by JSAGA.
<job xmlns:ext="http://www.in2p3.fr/jsdl-extension" xmlns:spmd="http://schemas.ogf.org/jsdl/2007/02/jsdl-spmd" xmlns:posix="http://schemas.ggf.org/jsdl/2005/11/jsdl-posix" xmlns:jsdl="http://schemas.ggf.org/jsdl/2005/11/jsdl"><executable>/bin/sh</executable><argument>start.sh</argument><stdout>stdout</stdout><stderr>stderr</stderr><fileStageIn><transfer><sourceUrl>gsiftp://xn03.ctsf.cdacb.in:2811/tmp/d0eb500d-3bd1-47da-bbad-a141c74ae22b/start.sh</sourceUrl><destinationUrl>file:///${GLOBUS_USER_HOME}/start.sh</destinationUrl></transfer><transfer><sourceUrl>gsiftp://xn03.ctsf.cdacb.in:2811/tmp/d0eb500d-3bd1-47da-bbad-a141c74ae22b/diego_mpi</sourceUrl><destinationUrl>file:///${GLOBUS_USER_HOME}/diego_mpi</destinationUrl></transfer></fileStageIn><fileStageOut><transfer><sourceUrl>file:///${GLOBUS_USER_HOME}/stdout</sourceUrl><destinationUrl>gsiftp://xn03.ctsf.cdacb.in:2811/tmp/d0eb500d-3bd1-47da-bbad-a141c74ae22b/stdout</destinationUrl></transfer><transfer><sourceUrl>file:///${GLOBUS_USER_HOME}/stderr</sourceUrl><destinationUrl>gsiftp://xn03.ctsf.cdacb.in:2811/tmp/d0eb500d-3bd1-47da-bbad-a141c74ae22b/stderr</destinationUrl></transfer></fileStageOut><extensions><stageDirectory>gsiftp://xn03.ctsf.cdacb.in:2811/tmp/d0eb500d-3bd1-47da-bbad-a141c74ae22b</stageDirectory><preStageIn><transfer><sourceUrl>/home/diego/mpitest/start.sh</sourceUrl><destinationUrl>gsiftp://xn03.ctsf.cdacb.in:2811/tmp/d0eb500d-3bd1-47da-bbad-a141c74ae22b/start.sh</destinationUrl><append>false</append></transfer><transfer><sourceUrl>/home/diego/mpitest/diego_mpi</sourceUrl><destinationUrl>gsiftp://xn03.ctsf.cdacb.in:2811/tmp/d0eb500d-3bd1-47da-bbad-a141c74ae22b/diego_mpi</destinationUrl><append>false</append></transfer></preStageIn><postStageOut><transfer><sourceUrl>gsiftp://xn03.ctsf.cdacb.in:2811/tmp/d0eb500d-3bd1-47da-bbad-a141c74ae22b/stdout</sourceUrl><destinationUrl>/home/diego/mpitest/stdout</destinationUrl><append>false</append></transfer><transfer><sourceUrl>gsiftp://xn03.ctsf.cdacb.in:2811/tmp/d0eb500d-3bd1-47da-bbad-a141c74ae22b/stderr</sourceUrl><destinationUrl>/home/diego/mpitest/stderr</destinationUrl><append>false</append></transfer></postStageOut></extensions><jobType>mpi</jobType><count>4</count><hostCount>2</hostCount></job>
Cheers,
Diego
Updated by Scardaci Diego almost 13 years ago
- File jsagajob.xml jsagajob.xml added
maybe it's better for you have it in a file format. Attached.
Cheers,
Diego
Updated by Reynaud Sylvain over 12 years ago
- Status changed from New to Resolved
- Assigned To set to Reynaud Sylvain
- % Done changed from 0 to 100
Element <factoryEndpoint> added to generated job description.